The LabelHash Server

Download

The LabelHash tools and ViewMatch plugin are distributed under the Rice University software distribution license. Make sure you understand the terms of this license. We are currently offering the following downloads:

  • The LabelHash tools, version 1.0.1 (release notes)   [Mac OS X] [64-bit Linux] [32-bit Linux]

    The package includes the command line utilities, a Python module and the ViewMatch plugin for Chimera 1.4. The ViewMatch plugin allows you to visualize the matches produced by either the LabelHash web server or the command line version.

    The LabelHash tools have been compiled with OpenMPI support. This means you need to have the OpenMPI runtime environment installed (even if you don't plan on running anything in parallel). On OS X OpenMPI is already installed, and on Linux you can easily install OpenMPI through your package manager.

    If happen to use a daily snapshot of Chimera 1.5, you will need a different version of LabelHash (linked against the python2.6 library). Download it here: [Mac OS X] [64-bit Linux] [32-bit Linux]

  • The ViewMatch plugin, version 1.0.1   [ViewMatch.zip].

    This download is intended for users of Chimera 1.4 who are mainly interested in visualizing matches generated by the web server and are not planning to use the command line tools. The ViewMatch module also relies on the OpenMPI runtime environment, even though at this point the plugin itself is not running anything in parallel. On OS X OpenMPI is already installed, and on Linux you can easily install OpenMPI through your package manager.

    If happen to use a daily snapshot of Chimera 1.5, you need a different version of the plugin. Download it here.

  • A snapshot of the PDB [pdb20090325.zip]
    It saves you the trouble of having to download the individual PDB files for your matches. This is a 8.5GB (!) download, though.
  • The giant LabelHash table for the PDB [pdb20090325.lhash3]
    This is the same LabelHash table we use in most of our experiments. It is a 65GB (!) download.
  • The LabelHash table for just the 95% sequence identity filtered PDB [nrpdb20090325.lhash3]
    This is a “just” a 9.7GB download.